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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9563114_9564431_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9563114 - 9564431

Intron Length:

1318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTATCATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTCTTCTTATCA

Flanking Amino Acid:

DEEGYEDEYVLEDLEVTVAD

Intron Amino Acid Position:

747

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

69.6

41.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

79.2

0.66

0.9

78.9

33.3

Minor 5ss

32.8

-2

3.1

39.9

40.3

Minor BPS

63.4

0.42

1.6

70.18

42.7

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030315

9547205 - 9566566

19362

ENSAPLT00000002947

9548695 - 9566336

17642