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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9564571_9565525_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9564571 - 9565525

Intron Length:

955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

TTTTTTTTAACA

Flanking Amino Acid:

FTLSAIKTLEEAVSNIVKFL

Intron Amino Acid Position:

793

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.6

36.7

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

90.7

0.92

0.7

88.7

26.8

Minor 5ss

36.1

-1.6

3.3

45.9

49.3

Minor BPS

86.3

1.14

0.8

90.59

23.6

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030315

9547205 - 9566566

19362

ENSAPLT00000002947

9548695 - 9566336

17642