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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9565625_9566205_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9565625 - 9566205

Intron Length:

581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

GACTACTCACTC

Flanking Amino Acid:

NKNSHTLYLAGVFRGGHDLL

Intron Amino Acid Position:

826

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.8

38.1

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

84.1

0.77

0.8

Minor 5ss

40.1

-1.1

3.1

55.9

48.3

Minor BPS

43.7

-0.4

1.9

49.55

40.7

Associated Gene:

Gene:

COPG1

Ensembl Gene ID:

ENSAPLG00000002838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030315

9547205 - 9566566

19362

ENSAPLT00000002947

9548695 - 9566336

17642