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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9586835_9587021_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9586835 - 9587021

Intron Length:

187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

TGGCACTAACTC

Flanking Amino Acid:

QTIARNALKQETEVELYNEF

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

66.4

45.1

Major BPS

64.5

0.36

65.2

28.2

Major PPT

67.3

0.39

0.9

61.5

Minor 5ss

31.5

-2.1

3.1

39.9

45.7

Minor BPS

-0.6

49.22

41.1

Associated Gene:

Gene:

RAB7A

Ensembl Gene ID:

ENSAPLG00000004323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030064

9585478 - 9588934

3457

ENSAPLT00000004447

9585478 - 9589977

4500