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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9587151_9587774_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9587151 - 9587774

Intron Length:

624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

TCTCTGTCCACC

Flanking Amino Acid:

GNKIDLENRQVTTKRAQAWC

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

83.3

27.9

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

70.7

0.47

0.9

62.4

38.9

Minor 5ss

34.6

-1.7

2.8

44.2

Minor BPS

40.8

-0.7

2.4

55.1

43.3

Associated Gene:

Gene:

RAB7A

Ensembl Gene ID:

ENSAPLG00000004323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030064

9585478 - 9588934

3457

ENSAPLT00000004447

9585478 - 9589977

4500