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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9587994_9588733_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9587994 - 9588733

Intron Length:

740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

GCTCACCTACCC

Flanking Amino Acid:

MVDDRLVTMQIWDTAGQERF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

52.1

0.05

1.3

41.8

Major PPT

85.3

0.8

80.7

31.4

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

43.7

-0.5

54.65

42.8

Associated Gene:

Gene:

RAB7A

Ensembl Gene ID:

ENSAPLG00000004323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030064

9585478 - 9588934

3457

ENSAPLT00000004447

9585478 - 9589977

4500