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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9588861_9589916_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9588861 - 9589916

Intron Length:

1056

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TCTTTCTGTACA

Flanking Amino Acid:

LLKVIILGDSGVGKTSLMNQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

67.1

44.6

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

84.1

0.77

0.8

79.7

32.4

Minor 5ss

31.6

-2.1

3.1

31.9

42.5

Minor BPS

58.1

0.25

1.8

71.49

40.4

Associated Gene:

Gene:

RAB7A

Ensembl Gene ID:

ENSAPLG00000004323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004447

9585478 - 9589977

4500