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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9616889_9617608_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9616889 - 9617608

Intron Length:

720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCATC

5'SS Class:

major

3'SS Sequence:

TGTTTTGGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTTTTGGAACA

Flanking Amino Acid:

EPRLAYLGVQVKGEEEEENT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

72.2

39.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

69.2

0.43

1.1

65.6

44.4

Minor 5ss

37.1

-1.5

3.3

50.7

46.2

Minor BPS

49.5

-0

2.1

68.24

38.3

Associated Gene:

Gene:

RPN1

Ensembl Gene ID:

ENSAPLG00000004411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004542

9616673 - 9624721

8049