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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9619529_9620030_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9619529 - 9620030

Intron Length:

502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAG

U12 Branch Point Sequence:

AATAAGTTACCT

Flanking Amino Acid:

PFKDIPPYSQDTLKVHYENN

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

29.3

Major BPS

56.1

0.15

1.6

64.3

39.7

Major PPT

74.2

0.54

0.9

69.5

36.8

Minor 5ss

36.6

-1.5

3.4

45.2

Minor BPS

44.1

-0.3

2.4

65.52

44.4

Associated Gene:

Gene:

RPN1

Ensembl Gene ID:

ENSAPLG00000004411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004542

9616673 - 9624721

8049