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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9621392_9621709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9621392 - 9621709

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGGGTGCT

5'SS Class:

major

3'SS Sequence:

TTCATTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TGGTCTTCATTC

Flanking Amino Acid:

LPSYEYLYNLGDQYALKMRF

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

66.2

39.6

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

76.4

0.59

0.8

69.5

36.7

Minor 5ss

-2.4

3.4

41.3

45.2

Minor BPS

48.7

-0.1

1.8

58.93

40.7

Associated Gene:

Gene:

RPN1

Ensembl Gene ID:

ENSAPLG00000004411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004542

9616673 - 9624721

8049