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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9622215_9622406_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9622215 - 9622406

Intron Length:

192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GTGTTTTGAACT

Flanking Amino Acid:

LVEQHIQDIVVHYTFNKILM

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

67.6

37.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

73.9

0.54

0.8

66.1

35.2

Minor 5ss

27.7

-2.6

29.4

36.9

Minor BPS

64.5

0.53

1.4

76.99

39.6

Associated Gene:

Gene:

RPN1

Ensembl Gene ID:

ENSAPLG00000004411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004542

9616673 - 9624721

8049