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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9622527_9623003_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9622527 - 9623003

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTAT

5'SS Class:

major

3'SS Sequence:

TGTCCTATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATCAA

U12 Branch Point Sequence:

TCTGTCCTATTC

Flanking Amino Acid:

YVRLDFSITKDPAAEARMKV

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

69.1

Major BPS

55.1

0.13

1.2

57.8

Major PPT

0.56

0.9

66.8

39.3

Minor 5ss

36.7

-1.5

3.6

55.1

49.1

Minor BPS

45.9

-0.3

1.9

57.78

41.9

Associated Gene:

Gene:

RPN1

Ensembl Gene ID:

ENSAPLG00000004411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004542

9616673 - 9624721

8049