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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9623250_9624312_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9623250 - 9624312

Intron Length:

1063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TCACTCCTATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CCTTTCTCACTC

Flanking Amino Acid:

KTEGSDLCDKVSEIQKLDSQ

Intron Amino Acid Position:

533

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.4

26.9

Major BPS

0.87

0.8

85.6

Major PPT

60.6

0.24

1.1

65.3

Minor 5ss

45.6

-0.5

3.1

65.7

39.5

Minor BPS

48.1

-0.1

1.8

57.18

42.5

Associated Gene:

Gene:

RPN1

Ensembl Gene ID:

ENSAPLG00000004411

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004542

9616673 - 9624721

8049