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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9707940_9708687_R

Intron Information:

Intron Rank:

150775

Intron Class:

major

Intron Phase:

Intron Coordinates:

9707940 - 9708687

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

AAGTATTTATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.7

44.5

Major BPS

100

1.24

0.5

100

Major PPT

84.1

0.77

0.8

78.2

34.9

Minor 5ss

39.7

-1.2

3.2

57.4

46.9

Minor BPS

49.8

-0

1.7

59.83

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035316

9707875 - 9712564

4690