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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9708741_9712059_R

Intron Information:

Intron Rank:

150776

Intron Class:

major

Intron Phase:

Intron Coordinates:

9708741 - 9712059

Intron Length:

3319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAAAC

U12 Branch Point Sequence:

TCTTCTTTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

76.2

Major BPS

60.1

0.25

1.1

68.6

33.3

Major PPT

80.5

0.69

27.3

Minor 5ss

46.4

-0.4

2.8

64.2

41.4

Minor BPS

72.1

0.56

1.4

72.3

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035316

9707875 - 9712564

4690