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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9728069_9730279_F

Intron Information:

Intron Rank:

132050

Intron Class:

major

Intron Phase:

Intron Coordinates:

9728069 - 9730279

Intron Length:

2211

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCAACCTCA

5'SS Class:

major

3'SS Sequence:

GCTGCTTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCTAG

U12 Branch Point Sequence:

CTGCTTTTGAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.3

54.2

44.3

Major BPS

-0.4

1.6

40.4

41.7

Major PPT

67.5

0.39

1.1

67.1

38.3

Minor 5ss

39.5

-1.2

53.7

45.4

Minor BPS

47.1

-0.3

1.5

47.75

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020940

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040179

9727655 - 9730362

2708