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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9904574_9915415_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9904574 - 9915415

Intron Length:

10842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTATCTTTTCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTCTGATTG

Flanking Amino Acid:

QSGKFKIRIPASIMVTRATP

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

76.6

0.6

75.6

38.3

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

57.1

0.08

1.8

67.65

40.5

Associated Gene:

Gene:

EEFSEC

Ensembl Gene ID:

ENSAPLG00000006745

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007012

9904485 - 9997288

92804