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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9929308_9957719_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9929308 - 9957719

Intron Length:

28412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCATCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

CTTCCATCAATA

Flanking Amino Acid:

GDNVEIPALKVTKKVKSMQM

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

81.3

32.8

Major BPS

0.82

0.8

24.9

Major PPT

67.5

0.39

0.9

31.9

Minor 5ss

33.3

-1.9

43.8

43.9

Minor BPS

52.1

0.06

1.8

66.51

39.8

Associated Gene:

Gene:

EEFSEC

Ensembl Gene ID:

ENSAPLG00000006745

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046973

9874438 - 9997288

122851

ENSAPLT00000007012

9904485 - 9997288

92804