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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9957885_9960597_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9957885 - 9960597

Intron Length:

2713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACCTGCT

5'SS Class:

major

3'SS Sequence:

TTTCTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

CTGCTTTTATCT

Flanking Amino Acid:

NPLGVSELIEVLKSQAYLPS

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

69.9

40.9

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

91.9

0.94

0.6

91.8

19.1

Minor 5ss

39.8

-1.1

3.4

59.5

44.9

Minor BPS

53.2

0.18

1.6

68.16

43.3

Associated Gene:

Gene:

EEFSEC

Ensembl Gene ID:

ENSAPLG00000006745

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046973

9874438 - 9997288

122851

ENSAPLT00000007012

9904485 - 9997288

92804