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Intron Name: Anas_platyrhynchos_platyrhynchos_13_9960695_9964533_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9960695 - 9964533

Intron Length:

3839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

GGAGATCTAACG

Flanking Amino Acid:

KKMQKTLENTKFCGCPIVAV

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

23.8

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

90.4

0.91

0.6

88.5

Minor 5ss

41.2

-1

2.8

49.4

41.3

Minor BPS

42.6

-0.7

1.9

43.66

41.3

Associated Gene:

Gene:

EEFSEC

Ensembl Gene ID:

ENSAPLG00000006745

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046973

9874438 - 9997288

122851

ENSAPLT00000007012

9904485 - 9997288

92804