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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10007756_10007866_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
10007756 - 10007866

Intron Length:
111

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGAGGGTG

5'SS Class:
major

3'SS Sequence:
CGGCCTCTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CAGAGAC

U12 Branch Point Sequence:
CGGGCAGAGACC

Flanking Amino Acid:
GERGRLPPINRCVGMMMWGQ

Intron Amino Acid Position:
75

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.1
0.62
1
64.2
41.9

Major BPS
43.7
-0.4
1
33.8
31.5

Major PPT
72.3
0.5
0.9
65.1
36.3

Minor 5ss
27.9
-2.5
3.6
38.1
46.8

Minor BPS
34.2
-1.2
2.3
38.66
40.6

Associated Gene:

Gene:
HK3

Ensembl Gene ID:

Chromosome:
14

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10004635 - 10008611
3977