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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10040411_10043199_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

10040411 - 10043199

Intron Length:

2789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTAGC

5'SS Class:

major

3'SS Sequence:

CTCCTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TGGCTTTCAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.3

68.8

42.3

Major BPS

76.9

0.67

1.2

31.9

Major PPT

81.8

0.71

0.8

79.5

32.5

Minor 5ss

37.6

-1.4

2.5

46.3

41.9

Minor BPS

49.2

-0

1.5

56.09

36.6

Associated Gene:

Gene:

UIMC1

Ensembl Gene ID:

ENSAPLG00000017474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019484

10007867 - 10043463

35597