Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_10061161_10061238_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10061161 - 10061238

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTGGCC

5'SS Class:

major

3'SS Sequence:

GCTCTGCCGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

GGATGCTCAGGG

Flanking Amino Acid:

DGVPYVQVLKTADINSSEVE

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.1

62.7

37.7

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

63.3

0.3

57.9

38.5

Minor 5ss

29.2

-2.4

3.7

41.9

45.1

Minor BPS

37.1

-1.1

2.2

38.23

Associated Gene:

Gene:

FGFR4

Ensembl Gene ID:

ENSAPLG00000018284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025139

10057928 - 10068428

10501

ENSAPLT00000018976

10057792 - 10068428

10637

ENSAPLT00000046882

10057792 - 10068428

10637