Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_10074718_10080475_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10074718 - 10080475

Intron Length:

5758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAAGCACC

5'SS Class:

major

3'SS Sequence:

GAACACTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CACCCCTGAACA

Flanking Amino Acid:

RAFRHGGPAARADSCVESSD

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.3

62.4

42.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

61.6

0.26

50.5

Minor 5ss

42.2

-0.9

2.8

54.2

36.9

Minor BPS

59.1

0.28

1.5

63.14

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023107

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047450

10073638 - 10080837

7200