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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10148334_10149695_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10148334 - 10149695

Intron Length:

1362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGTTGC

5'SS Class:

major

3'SS Sequence:

CTGTTGCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

GCCAGCTGAACG

Flanking Amino Acid:

LAPACTPQHNGQPPQHPTTP

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

65.8

41.1

Major BPS

58.2

0.2

1.1

49.1

Major PPT

74.8

0.56

0.9

68.9

37.1

Minor 5ss

46.2

-0.4

2.5

52.5

44.7

Minor BPS

44.9

-0.5

45.55

46.4

Associated Gene:

Gene:

PDLIM7

Ensembl Gene ID:

ENSAPLG00000015874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016573

10144846 - 10156305

11460