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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10151032_10156198_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10151032 - 10156198

Intron Length:

5167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTCCTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CTCCCCCTGACT

Flanking Amino Acid:

DFSMPLSISRLTPGGKAAQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.3

34.5

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

72.1

0.5

0.9

66.3

35.8

Minor 5ss

29.3

-2.4

3.3

29.9

43.1

Minor BPS

57.1

0.31

1.8

73.66

43.2

Associated Gene:

Gene:

PDLIM7

Ensembl Gene ID:

ENSAPLG00000015874

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045484

10144846 - 10156483

11638

ENSAPLT00000024112

10144846 - 10156483

11638

ENSAPLT00000016573

10144846 - 10156305

11460