Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_14_10159127_10159205_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

10159127 - 10159205

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGCCC

5'SS Class:

major

3'SS Sequence:

CCCTCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CCACGCTCACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

41.7

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

77.4

0.62

0.9

71.4

32.9

Minor 5ss

36.5

-1.5

3.5

51.8

44.9

Minor BPS

41.4

-0.5

2.1

54.09

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034731

10157897 - 10159264

1368