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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10175814_10175916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10175814 - 10175916

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCA

5'SS Class:

strong_major

3'SS Sequence:

CCGTTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCGTAC

U12 Branch Point Sequence:

CCCTCCGTACCC

Flanking Amino Acid:

LLHRARLHIQRLQEQEVRAR

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

0.9

67.6

39.4

Major BPS

47.6

-0.1

1.4

45.3

39.5

Major PPT

71.6

0.49

0.8

65.4

30.4

Minor 5ss

32.7

-2

39.6

45.9

Minor BPS

46.7

-0.2

2.3

57.24

47.8

Associated Gene:

Gene:

MXD3

Ensembl Gene ID:

ENSAPLG00000017205

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035061

10175285 - 10176300

1016