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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10180117_10180294_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10180117 - 10180294

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCCGGC

5'SS Class:

major

3'SS Sequence:

TCCCCTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CAGCCCCTGACC

Flanking Amino Acid:

SPKDNNPKAKPHKSHPMDPT

Intron Amino Acid Position:

1313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.2

0.34

1.3

53.3

45.2

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

74.2

0.55

0.7

68.7

Minor 5ss

41.2

-1

3.5

59.3

45.4

Minor BPS

49.4

-0

1.7

57.09

41.5

Associated Gene:

Gene:

CDHR2

Ensembl Gene ID:

ENSAPLG00000009589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009985

10179997 - 10189272

9276