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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10180356_10180440_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10180356 - 10180440

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

TGTCCCTTAACC

Flanking Amino Acid:

GFHEDTSSLASINSLDENKV

Intron Amino Acid Position:

1292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

33.5

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

73.6

0.53

0.7

25.5

Minor 5ss

-1

56.7

47.6

Minor BPS

83.4

1.03

1.1

85.39

32.3

Associated Gene:

Gene:

CDHR2

Ensembl Gene ID:

ENSAPLG00000009589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009985

10179997 - 10189272

9276