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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10180960_10181050_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10180960 - 10181050

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TGCTCCGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

CTGCCCTCAGCC

Flanking Amino Acid:

KLVDMGLAIIGSGEVTETNK

Intron Amino Acid Position:

1187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

55.8

43.4

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

71.7

0.49

0.9

61.9

39.9

Minor 5ss

28.2

-2.5

3.1

31.7

36.8

Minor BPS

49.2

-0

1.9

60.22

44.7

Associated Gene:

Gene:

CDHR2

Ensembl Gene ID:

ENSAPLG00000009589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009985

10179997 - 10189272

9276