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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10187065_10187179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10187065 - 10187179

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCCTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TGCCCCTCACCT

Flanking Amino Acid:

VTVSDGINDATSRKLTVIVE

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

65.5

0.35

57.8

38.5

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

51.5

0.12

1.9

70.65

45.7

Associated Gene:

Gene:

CDHR2

Ensembl Gene ID:

ENSAPLG00000009589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009985

10179997 - 10189272

9276