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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10187502_10187587_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10187502 - 10187587

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAC

U12 Branch Point Sequence:

CTGACACCACCC

Flanking Amino Acid:

IEYVPEDLLIGEVAFVLKAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

48.1

-0.1

1.2

56.1

39.6

Major PPT

72.8

0.51

0.8

64.2

36.7

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

36.4

-1

2.1

45.3

42.7

Associated Gene:

Gene:

CDHR2

Ensembl Gene ID:

ENSAPLG00000009589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009985

10179997 - 10189272

9276