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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10187654_10187913_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10187654 - 10187913

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACT

5'SS Class:

strong_major

3'SS Sequence:

GTCCTCCTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAG

U12 Branch Point Sequence:

GTGCGCTCAGCT

Flanking Amino Acid:

LLLLPFLLAAASGNAPPIFD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.8

81.2

32.3

Major BPS

47.4

-0.1

1.6

54.7

43.1

Major PPT

75.3

0.57

0.8

69.6

31.2

Minor 5ss

29.5

-2.4

3.1

40.4

45.5

Minor BPS

44.4

-0.3

2.1

62.76

46.7

Associated Gene:

Gene:

CDHR2

Ensembl Gene ID:

ENSAPLG00000009589

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009985

10179997 - 10189272

9276