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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10210992_10212302_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10210992 - 10212302

Intron Length:

1311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CCCTTATGCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTTAT

U12 Branch Point Sequence:

GCCCCTGTAACT

Flanking Amino Acid:

PVFYQGTYSQALNDAKRELR

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

1.2

80.7

33.6

Major BPS

66.5

0.41

1.1

57.2

40.1

Major PPT

56.8

0.15

1.1

55.3

38.3

Minor 5ss

32.7

-2

3.2

43.9

43.8

Minor BPS

49.3

0.02

65.47

45.3

Associated Gene:

Gene:

FAF2

Ensembl Gene ID:

ENSAPLG00000009406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009821

10207396 - 10216496

9101