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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10249739_10249823_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

10249739 - 10249823

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCCTGT

5'SS Class:

weak_minor

3'SS Sequence:

TCTCCTGTCCTAG|G

3'SS Class:

minor_hybrid

U2 Branch Point Sequence:

ACCAAAT

U12 Branch Point Sequence:

ACCTCTCCGACT

Flanking Amino Acid:

GHSSVLLQYQDDVATWQRWD

Intron Amino Acid Position:

756

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.43

1.2

62.3

44.7

Major BPS

55.9

0.15

61.2

32.6

Major PPT

72.1

0.5

0.8

64.9

36.3

Minor 5ss

75.2

0.85

1.8

82.7

36.6

Minor BPS

46.3

-0.2

1.9

62.01

42.3

Associated Gene:

Gene:

SIMC1

Ensembl Gene ID:

ENSAPLG00000009331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009715

10247165 - 10255361

8197