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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10251707_10252150_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10251707 - 10252150

Intron Length:

444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGGGAT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

ACCCCACTAACG

Flanking Amino Acid:

LSCNGCFSNVKEVVEWLVAA

Intron Amino Acid Position:

603

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

75.8

33.6

Major BPS

64.5

0.36

65.2

28.2

Major PPT

81.4

0.71

0.8

73.3

37.1

Minor 5ss

32.6

-2

3.7

46.6

43.4

Minor BPS

45.4

-0.4

49.35

43.8

Associated Gene:

Gene:

SIMC1

Ensembl Gene ID:

ENSAPLG00000009331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009715

10247165 - 10255361

8197