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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10253220_10253393_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10253220 - 10253393

Intron Length:

174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGGG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGCACGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TGGTTTTCACCC

Flanking Amino Acid:

GLTRNRETLQQKAELIPSRR

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

69.5

41.5

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

68.1

0.41

61.9

Minor 5ss

31.4

-2.1

3.2

40.6

45.6

Minor BPS

47.9

-0.1

1.8

58.35

Associated Gene:

Gene:

SIMC1

Ensembl Gene ID:

ENSAPLG00000009331

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009715

10247165 - 10255361

8197