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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10368001_10371994_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10368001 - 10371994

Intron Length:

3994

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GCACTGCGGTCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTGGAT

U12 Branch Point Sequence:

GCTTTGTGGATT

Flanking Amino Acid:

LALAFFCFFSACLCETTFLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

1.1

84.4

27.7

Major BPS

56.3

0.16

1.5

57.1

49.4

Major PPT

52.3

0.05

1.1

49.9

43.7

Minor 5ss

31.4

-2.1

2.4

41.4

Minor BPS

45.3

-0.2

2.1

63.37

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038723

10367943 - 10372164

4222