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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10396537_10397811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10396537 - 10397811

Intron Length:

1275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAGCAT

U12 Branch Point Sequence:

CTTTGTTTCACA

Flanking Amino Acid:

DGRCVEEVPQLDCSKYPTST

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

49.2

-0

1.5

59.7

46.7

Major PPT

84.3

0.77

0.8

79.2

32.9

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

52.6

0.07

2.2

70.26

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001082

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001095

10233849 - 10399450

165602

ENSAPLT00000001102

10389030 - 10398600

9571