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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10406532_10411772_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10406532 - 10411772

Intron Length:

5241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

CTTTGTTTCACT

Flanking Amino Acid:

GAQHELAGNKDAAFGVEVDC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

77.1

37.8

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

85.9

0.81

0.6

80.5

31.5

Minor 5ss

42.9

-0.8

2.8

59.8

44.7

Minor BPS

55.3

0.25

2.2

78.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037075

10405397 - 10415895

10499