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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1041815_1046242_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1041815 - 1046242

Intron Length:

4428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TACTACATAAAT

Flanking Amino Acid:

EVAVGIVIYAGHETKAMLNN

Intron Amino Acid Position:

301

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.9

36.7

Major BPS

71.4

0.53

67.3

39.3

Major PPT

74.1

0.54

1.1

75.2

38.8

Minor 5ss

34.5

-1.8

3.1

49.5

46.3

Minor BPS

0.14

1.9

72.96

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012549

1013179 - 1064319

51141