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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10453899_10454301_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10453899 - 10454301

Intron Length:

403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

ATTATTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

CTTTCATGCATT

Flanking Amino Acid:

VHTPRRGLIDVKPLGVIWGK

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

80.9

31.3

Major BPS

87.6

0.93

0.9

89.3

Major PPT

83.8

0.76

0.8

77.9

35.8

Minor 5ss

39.4

-1.2

2.7

51.9

37.5

Minor BPS

48.4

-0

2.2

73.82

43.2

Associated Gene:

Gene:

UBLCP1

Ensembl Gene ID:

ENSAPLG00000015997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023084

10449955 - 10460325

10371

ENSAPLT00000016705

10445819 - 10460325

14507