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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10454401_10456850_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10454401 - 10456850

Intron Length:

2450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTAATAATT

Flanking Amino Acid:

NMKWIEAKMKELGVSTNANY

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

33.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.9

0.56

69.4

40.8

Minor 5ss

43.6

-0.7

2.9

58.5

40.3

Minor BPS

57.6

0.32

1.8

80.33

35.1

Associated Gene:

Gene:

UBLCP1

Ensembl Gene ID:

ENSAPLG00000015997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023084

10449955 - 10460325

10371

ENSAPLT00000016705

10445819 - 10460325

14507