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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10459301_10459633_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10459301 - 10459633

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTATTCGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTGTTATTATTC

Flanking Amino Acid:

MMMGTREESLEDVLGPPPDN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

82.1

30.4

Major BPS

84.7

0.86

74.3

40.7

Major PPT

70.7

0.47

63.1

43.4

Minor 5ss

36.9

-1.5

2.9

47.6

42.5

Minor BPS

52.6

0.06

1.8

66.69

39.5

Associated Gene:

Gene:

UBLCP1

Ensembl Gene ID:

ENSAPLG00000015997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023084

10449955 - 10460325

10371

ENSAPLT00000016705

10445819 - 10460325

14507