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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1046350_1049280_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1046350 - 1049280

Intron Length:

2931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TTTATTTTACTT

Flanking Amino Acid:

NNDLNKFKGYMEKPNNERIG

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

87.3

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

86.6

0.82

0.6

81.5

30.5

Minor 5ss

42.7

-0.8

2.8

59.4

38.1

Minor BPS

61.4

0.44

1.6

79.53

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012549

1013179 - 1064319

51141