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Intron Name: Anas_platyrhynchos_platyrhynchos_14_1049367_1052363_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1049367 - 1052363

Intron Length:

2997

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTGTATTTAATG

Flanking Amino Acid:

RRVVMGFSGQNTLFEPEFFQ

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

87.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

37.8

-1.4

49.8

46.4

Minor BPS

65.1

0.33

1.5

67.86

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012549

1013179 - 1064319

51141