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Intron Name: Anas_platyrhynchos_platyrhynchos_14_10505239_10506660_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10505239 - 10506660

Intron Length:

1422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTTGATCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

ATTTCTTTTACT

Flanking Amino Acid:

RAFMNDPAMNRGMTEGVTLL

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

77.5

0.62

0.9

70.5

40.2

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

75.8

0.89

1.5

90.35

33.1

Associated Gene:

Gene:

RNF145

Ensembl Gene ID:

ENSAPLG00000015567

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016251

10476206 - 10512686

36481