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Intron Name: Anas_platyrhynchos_platyrhynchos_14_108060_108149_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

108060 - 108149

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCAGTCC

5'SS Class:

major

3'SS Sequence:

TTCCTCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

GAGTTCTGAGGC

Flanking Amino Acid:

GQSVLVPAFAGAMSLAGAQG

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.1

36.8

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

77.6

0.62

0.7

69.6

31.2

Minor 5ss

30.8

-2.2

3.4

41.9

45.1

Minor BPS

43.5

-0.5

1.9

48.82

40.9

Associated Gene:

Gene:

PCYOX1L

Ensembl Gene ID:

ENSAPLG00000011797

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012271

107092 - 109386

2295