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Intron Name: Anas_platyrhynchos_platyrhynchos_14_11102944_11127498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11102944 - 11127498

Intron Length:

24555

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTGAGTACG

5'SS Class:

major

3'SS Sequence:

TCTTCCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGTGTGTTAATT

Flanking Amino Acid:

MWKVRELVDKATNVVMNYSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.9

0.35

1.3

62.3

43.9

Major BPS

84.4

0.85

34.5

Major PPT

89.2

0.88

0.6

84.3

23.5

Minor 5ss

31.5

-2.1

2.6

30.4

35.1

Minor BPS

54.5

0.22

2.1

75.64

41.8

Associated Gene:

Gene:

CLINT1

Ensembl Gene ID:

ENSAPLG00000013481

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044696

11102903 - 11149797

46895

ENSAPLT00000028391

11102903 - 11149797

46895

ENSAPLT00000014098

11102903 - 11150220

47318